BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E03SP1|AL427017
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1505 0.0
>3x_Contig1675
Length = 13954
Score = 1505 bits (750), Expect = 0.0
Identities = 773/790 (97%)
Strand = Plus / Plus
Query: 1 atacgaaccatcccaaacgattcatcgcgagtaaaagttaaagatcccggtatagcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6156 atacgaaccatcccaaacgattcatcgcgagtaaaagttaaagatcccggtatagcatca 6215
Query: 61 taaaacgcaggccatccgcagcctgagtcgaacttcgtctcactcttataaataggcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6216 taaaacgcaggccatccgcagcctgagtcgaacttcgtctcactcttataaataggcaaa 6275
Query: 121 tcgcaatttgcacatgagttaatccctgtttgtttgttgtgcaagtratttcctgtgttt 180
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 6276 tcgcaatttgcacatgagtaaatccctgtttgtttgttgtgcaagtaatttcctgtgttt 6335
Query: 181 ggtctctccgtacccttatcacgtagtactcttagctgttctgaagtcaaactcggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6336 ggtctctccgtacccttatcacgtagtactcttagctgttctgaagtcaaactcggattc 6395
Query: 241 catttaccggtgctattcattgttctgtaaaattgctttgataagtttaaagataaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6396 catttaccggtgctattcattgttctgtaaaattgctttgataagtttaaagataaaatc 6455
Query: 301 cttgaacaacttcttgagagcatcaaaagtgtgaaacaattatggrgtggtaaaacttta 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6456 cttgaacaacttcttgagagcatcaaaagtgtgaaacaattatggagtggtaaaacttta 6515
Query: 361 agaattatacctatcaacaaaataatgaaagctgaacaatagatccgatggtgattacma 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6516 agaattatacctatcaacaaaataatgaaagctgaacaatagatccgatggtgattacaa 6575
Query: 421 atgcgagtttccagttgttttctctttacgatagcmtggctcatcggcttcttgcagara 480
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 6576 atgcgagtttccagttgttttctctttacgatagcatggctcatcggcttcttgcagaaa 6635
Query: 481 gctagttgaraavmtccaaaattctataatttrcagcttaaacatctttgtcaataaaga 540
||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6636 gctagttgaaaaaatccaaaattctataatttacagcttaaacatctttgtcaataaaga 6695
Query: 541 gcaatctacaaaacgaaagasgggggttgattacggaagcmgcaaaccagtccgcccagt 600
|||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||
Sbjct: 6696 gcaatctacaaaacgaaagaaggaggttgattacggaagcagcaaaccagtccgcccagt 6755
Query: 601 tttgaccattaccacagctacttaccaaatagaraatvtcatagactgtvaacgatattc 660
||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 6756 tttgaccattaccacagctacttaccaaatagaaaatatcatagactgtaaacgatattc 6815
Query: 661 aacactatgtcatctaattatccaacaacaatgtcttgcactgatgcatttgatcagtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6816 aacactatgtcatctaattatccaacaacaatgtcttgcactgatgcatttgatcagtta 6875
Query: 721 acaggatgtttcagtttaggaggtcagtttagaaattwctacagacatggccacatgaac 780
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6876 acaggatgtttcagtttaggaggtcagtttagaaattactacagacatggccacatgaac 6935
Query: 781 gaatgtctga 790
||||||||||
Sbjct: 6936 gaatgtctga 6945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4695
Number of Sequences: 1807
Number of extensions: 4695
Number of successful extensions: 95
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)